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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
184
ChIP-seq
Assay category
184
DNA binding
Target of assay
338
transcription factor
108
control
103
histone modification
102
histone
82
recombinant protein
60
narrow histone mark
58
RNA binding protein
42
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
81
November, 2017
32
August, 2017
27
May, 2020
17
December, 2017
16
November, 2018
6
August, 2021
5
October, 2019
Available data
163
bigWig
161
bam
161
bed narrowPeak
126
fastq
116
bigBed narrowPeak
58
tagAlign
14
bed broadPeak
14
bigBed broadPeak
3
bed bed3+
Organism
184
Homo sapiens
Biosample type
100
cell line
69
tissue
12
in vitro differentiated cells
3
primary cell
Organ
187
brain
184
liver
151
pancreas
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
62
heart
49
limb
37
kidney
33
musculature of body
32
adipose tissue
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
184
AMP
Genome assembly (visualization)
160
hg19
150
GRCh38
Lab
181
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
2
missing controlled_by
Audit category:
13
inconsistent control read length
BIOSAMPLE
ASSAY
184 results
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Clear Filters
ChIP-seq
cell line
HepG2
100
tissue
liver
64
right lobe of liver
5
in vitro differentiated cells
hepatocyte
12
primary cell
hepatocyte
3
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