Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
385
ChIP-seq
Assay category
385
DNA binding
Target of assay
350
transcription factor
89
recombinant protein
76
control
64
RNA binding protein
35
histone
35
histone modification
30
chromatin remodeller
18
broad histone mark
17
narrow histone mark
2
other context
2
other post-translational modification
Date released
256
November, 2017
57
November, 2018
25
December, 2018
15
January, 2019
14
October, 2019
11
November, 2019
5
February, 2021
1
March, 2020
1
May, 2021
Available data
384
bam
379
bigWig
373
bed narrowPeak
353
fastq
348
bigBed narrowPeak
58
bed broadPeak
58
bigBed broadPeak
16
tagAlign
3
tar
Organism
385
Homo sapiens
Biosample type
681
tissue
385
cell line
133
primary cell
129
in vitro differentiated cells
2
stem cell
Organ
301
liver
52
blood
52
bodily fluid
20
pancreas
13
epithelium
7
kidney
4
artery
4
blood vessel
4
heart
4
vasculature
Project
383
AMP
2
T1D
Genome assembly (visualization)
375
hg19
341
GRCh38
Lab
385
AMP-T2D consortium
14
Bing Ren, UCSD
Audit category:
20
inconsistent ontology term
1
inconsistent control
Audit category:
13
missing controlled_by
Audit category:
26
inconsistent control read length
8
inconsistent control run_type
BIOSAMPLE
ASSAY
385 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
301
GM12878
52
EndoC_BH1
13
Panc1
7
smooth muscle cell of the coronary artery
4
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
iPSC derived cell line
1
See all biosamples
Download