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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
681
ChIP-seq
Assay category
681
DNA binding
Target of assay
593
histone modification
592
histone
309
narrow histone mark
283
broad histone mark
187
control
89
transcription factor
23
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
168
October, 2019
146
August, 2017
93
May, 2019
70
November, 2017
66
April, 2019
45
October, 2018
36
December, 2017
27
May, 2020
12
October, 2017
7
November, 2018
6
January, 2019
3
December, 2018
2
March, 2020
Available data
574
bigWig
554
bam
554
bed narrowPeak
377
bigBed narrowPeak
186
tagAlign
152
fastq
35
bed broadPeak
25
bed bed3+
1
tagAlign bed3+
Organism
675
Homo sapiens
Biosample type
681
tissue
399
cell line
247
primary cell
161
in vitro differentiated cells
2
stem cell
Organ
184
brain
108
liver
90
pancreas
67
heart
57
blood vessel
57
vasculature
50
connective tissue
49
adipose tissue
49
limb
25
musculature of body
24
nerve
21
artery
21
kidney
12
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
679
AMP
2
T1D
Genome assembly (visualization)
546
GRCh38
525
hg19
Lab
681
AMP-T2D consortium
Audit category:
27
inconsistent control
2
inconsistent ontology term
Audit category:
26
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
681 results
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Clear Filters
ChIP-seq
tissue
liver
101
islet of Langerhans
58
subcutaneous abdominal adipose tissue
31
heart left ventricle
29
body of pancreas
26
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