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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
152
ChIP-seq
Assay category
152
DNA binding
Target of assay
79
transcription factor
74
histone modification
73
histone
67
control
45
broad histone mark
28
narrow histone mark
15
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
62
August, 2017
36
December, 2017
31
October, 2018
7
November, 2018
7
October, 2017
6
January, 2019
3
December, 2018
Available data
614
bigWig
594
bed narrowPeak
554
bam
377
bigBed narrowPeak
186
tagAlign
152
fastq
35
bed broadPeak
25
bed bed3+
1
tagAlign bed3+
Organism
146
Homo sapiens
Biosample type
353
cell line
152
tissue
98
in vitro differentiated cells
78
primary cell
2
stem cell
Organ
59
pancreas
56
liver
18
adipose tissue
18
connective tissue
12
spleen
7
brain
Project
152
AMP
Genome assembly (visualization)
151
GRCh38
151
hg19
Lab
152
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
26
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
152 results
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ChIP-seq
tissue
liver
49
body of pancreas
25
islet of Langerhans
21
pancreas
13
spleen
12
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