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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
Assay category
24
DNA binding
Target of assay
24
histone
24
histone modification
15
transcription factor
14
narrow histone mark
11
chromatin remodeller
10
broad histone mark
6
RNA binding protein
1
recombinant protein
Date released
11
November, 2017
10
August, 2017
2
December, 2017
1
October, 2018
Available data
24
bam
24
bigWig
24
fastq
22
bed narrowPeak
16
bigBed narrowPeak
11
bed broadPeak
11
bigBed broadPeak
11
tagAlign
2
bed bed3+
Organism
24
Homo sapiens
Biosample type
11
cell line
in vitro differentiated cells
6
tissue
5
primary cell
2
stem cell
Organ
12
liver
9
pancreas
4
epithelium
Project
24
AMP
Genome assembly (visualization)
24
hg19
22
GRCh38
Lab
24
AMP-T2D consortium
Audit category:
24
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
24 results
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ChIP-seq
cell line
HepG2
11
tissue
pancreas
4
body of pancreas
1
liver
1
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
skeletal muscle myoblast
1
stem cell
hESC
2
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