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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
299
ChIP-seq
Assay category
299
DNA binding
Target of assay
299
histone
299
histone modification
164
narrow histone mark
135
broad histone mark
68
control
9
transcription factor
Date released
85
May, 2021
63
August, 2017
56
November, 2017
40
October, 2019
27
May, 2020
16
August, 2021
12
October, 2017
Available data
869
bigWig
851
bed narrowPeak
785
bam
391
bigBed narrowPeak
321
tagAlign
230
fastq
65
bed broadPeak
bigBed broadPeak
25
bed bed3+
1
tagAlign bed3+
Organism
293
Homo sapiens
Biosample type
186
tissue
87
primary cell
26
in vitro differentiated cells
Organ
99
brain
47
liver
19
connective tissue
15
pancreas
13
musculature of body
7
adipose tissue
4
epithelium
1
pituitary gland
Project
215
AMP
84
T1D
Genome assembly (visualization)
217
GRCh38
205
hg19
Lab
215
AMP-T2D consortium
84
Kyle Gaulton, UCSD
Audit category:
4
missing controlled_by
Audit category:
1
inconsistent assembly
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
299 results
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Clear Filters
ChIP-seq
tissue
liver
44
substantia nigra
14
caudate nucleus
13
layer of hippocampus
13
skeletal muscle tissue
13
+ See 43 more…
primary cell
monocyte
84
hepatocyte
3
in vitro differentiated cells
neural progenitor cell
13
adipocyte
12
pancreatic PP cell
1
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