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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
189
ChIP-seq
Assay category
189
DNA binding
Target of assay
189
histone modification
188
histone
106
broad histone mark
81
narrow histone mark
50
control
41
transcription factor
8
RNA binding protein
1
chromatin remodeller
Date released
196
October, 2019
189
August, 2017
140
May, 2021
92
May, 2019
77
November, 2017
60
April, 2019
32
September, 2018
29
October, 2018
27
May, 2020
24
December, 2017
20
August, 2021
19
June, 2019
14
February, 2018
12
October, 2017
10
November, 2019
7
January, 2019
3
March, 2020
Available data
113
bigWig
98
bed narrowPeak
93
bam
93
fastq
74
tagAlign
37
bed broadPeak
24
bigBed narrowPeak
12
bed bed3+
11
bigBed broadPeak
Organism
183
Homo sapiens
Biosample type
119
tissue
37
in vitro differentiated cells
33
primary cell
Organ
69
connective tissue
58
pancreas
32
adipose tissue
32
liver
19
musculature of body
10
epithelium
Project
189
AMP
Genome assembly (visualization)
113
hg19
93
GRCh38
Lab
189
AMP-T2D consortium
Audit category:
16
missing controlled_by
Audit category:
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
189 results
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Clear Filters
ChIP-seq
tissue
liver
32
subcutaneous abdominal adipose tissue
31
islet of Langerhans
28
skeletal muscle tissue
19
pancreas
8
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in vitro differentiated cells
adipocyte
37
primary cell
pancreatic endocrine cell
12
skeletal muscle myoblast
11
pancreatic alpha cell
5
pancreatic beta cell
5
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