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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ChIP-seq
Assay category
38
DNA binding
Target of assay
56
transcription factor
38
histone
38
histone modification
25
control
19
broad histone mark
19
narrow histone mark
10
RNA binding protein
9
chromatin remodeller
Date released
199
August, 2017
196
October, 2019
140
May, 2021
92
May, 2019
88
November, 2017
60
April, 2019
32
September, 2018
31
December, 2017
30
October, 2018
27
May, 2020
20
August, 2021
19
June, 2019
16
February, 2018
12
October, 2017
10
November, 2019
7
January, 2019
3
March, 2020
Available data
38
bam
38
fastq
37
bed narrowPeak
37
bigWig
24
bigBed narrowPeak
10
bed bed3+
Organism
38
Homo sapiens
Biosample type
24
in vitro differentiated cells
11
tissue
2
stem cell
1
cell line
Organ
17
liver
14
epithelium
6
embryo
6
spleen
1
blood
1
bodily fluid
Project
38
AMP
Genome assembly (visualization)
37
GRCh38
37
hg19
Lab
38
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
7
inconsistent control read length
BIOSAMPLE
ASSAY
38 results
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ChIP-seq
in vitro differentiated cells
hepatocyte
12
pancreatic endoderm
4
Hepatic endoderm
2
Posterior foregut
2
definitive endodermal cell
2
+ See 1 more…
tissue
spleen
6
right lobe of liver
5
stem cell
hESC
2
cell line
GM12878
1
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