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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
Assay category
6
DNA binding
Target of assay
45
transcription factor
6
histone
6
histone modification
5
RNA binding protein
4
narrow histone mark
3
chromatin remodeller
2
broad histone mark
1
other context
1
other post-translational modification
Date released
11
August, 2017
6
November, 2017
2
October, 2019
Available data
65
bed narrowPeak
64
bam
64
bigBed narrowPeak
64
bigWig
56
tagAlign
12
bed broadPeak
7
fastq
6
bigBed broadPeak
Organism
6
Homo sapiens
Biosample type
3
cell line
3
primary cell
Organ
3
brain
3
liver
2
epithelium
2
vasculature
1
blood vessel
Project
6
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
6
AMP-T2D consortium
Audit category:
inconsistent control read length
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
6 results
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ChIP-seq
cell line
HepG2
3
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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