Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
239
ChIP-seq
Assay category
239
DNA binding
Target of assay
239
histone
239
histone modification
123
broad histone mark
116
narrow histone mark
36
control
10
RNA binding protein
10
transcription factor
1
chromatin remodeller
Date released
118
May, 2021
38
August, 2017
32
September, 2018
21
October, 2019
19
June, 2019
3
August, 2021
3
May, 2019
3
November, 2017
2
December, 2017
Available data
232
bigWig
218
bed narrowPeak
205
bam
98
tagAlign
75
fastq
47
bigBed narrowPeak
16
bed broadPeak
16
bigBed broadPeak
5
bed bed3+
Organism
239
Homo sapiens
Biosample type
628
tissue
237
primary cell
112
in vitro differentiated cells
37
cell line
2
stem cell
Organ
66
epithelium
58
pancreas
17
vasculature
16
blood vessel
15
vein
10
kidney
8
connective tissue
8
musculature of body
3
brain
3
liver
2
heart
1
eye
Project
155
AMP
84
T1D
Genome assembly (visualization)
232
hg19
200
GRCh38
Lab
125
AMP-T2D consortium
114
Kyle Gaulton, UCSD
Audit category:
17
inconsistent ontology term
Audit category:
44
missing controlled_by
Audit category:
7
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
239 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
primary cell
monocyte
85
CD8-positive, alpha-beta T cell
30
pancreatic endocrine cell
23
endothelial cell of umbilical vein
15
pancreatic ductal cell
13
+ See 18 more…
stem cell
hESC
2
See all biosamples
Download