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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
626
ChIP-seq
Assay category
626
DNA binding
Target of assay
626
histone modification
625
histone
322
narrow histone mark
303
broad histone mark
187
control
94
transcription factor
28
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
166
October, 2019
124
August, 2017
89
May, 2019
70
November, 2017
60
April, 2019
35
May, 2024
30
October, 2018
27
May, 2020
12
October, 2017
6
January, 2019
5
December, 2017
2
March, 2020
Available data
522
bigWig
520
bed narrowPeak
466
bam
312
bigBed narrowPeak
186
tagAlign
74
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
620
Homo sapiens
Biosample type
626
tissue
236
primary cell
112
in vitro differentiated cells
38
cell line
2
stem cell
Organ
184
brain
95
heart
73
pancreas
70
liver
54
blood vessel
54
vasculature
49
limb
33
connective tissue
32
adipose tissue
25
musculature of body
24
nerve
20
artery
20
kidney
6
spleen
4
gonad
4
ovary
eye
1
lymph node
1
pituitary gland
Project
624
AMP
2
T1D
Genome assembly (visualization)
494
GRCh38
438
hg19
Lab
591
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
organ_slims!
eye
BIOSAMPLE
ASSAY
626 results
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Clear Filters
ChIP-seq
tissue
liver
65
islet of Langerhans
49
left cardiac atrium
35
subcutaneous abdominal adipose tissue
31
heart left ventricle
24
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