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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
105
ChIP-seq
Assay category
105
DNA binding
Target of assay
389
transcription factor
114
control
105
histone modification
104
histone
82
recombinant protein
68
RNA binding protein
62
narrow histone mark
42
broad histone mark
33
chromatin remodeller
2
other context
2
other post-translational modification
Date released
33
August, 2017
27
May, 2020
17
December, 2017
15
November, 2017
6
August, 2021
6
October, 2019
1
January, 2019
Available data
85
bigWig
83
bed narrowPeak
82
bam
59
tagAlign
46
fastq
36
bigBed narrowPeak
14
bed broadPeak
14
bigBed broadPeak
3
bed bed3+
Organism
105
Homo sapiens
Biosample type
71
tissue
19
cell line
12
in vitro differentiated cells
3
primary cell
Organ
187
brain
151
pancreas
103
liver
97
heart
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
105
AMP
Genome assembly (visualization)
85
hg19
72
GRCh38
Lab
102
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
12
inconsistent control read length
BIOSAMPLE
ASSAY
105 results
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Clear Filters
ChIP-seq
tissue
liver
65
right lobe of liver
5
pituitary gland
1
cell line
HepG2
18
GM12878
1
in vitro differentiated cells
hepatocyte
12
primary cell
hepatocyte
3
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