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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
Assay category
80
DNA binding
Target of assay
80
histone
80
histone modification
49
broad histone mark
31
narrow histone mark
26
control
11
transcription factor
4
RNA binding protein
Date released
36
May, 2019
33
October, 2019
6
February, 2018
4
December, 2017
1
November, 2017
Available data
80
bam
76
bigWig
74
bed narrowPeak
65
bigBed narrowPeak
11
fastq
3
bed broadPeak
3
bigBed broadPeak
2
bed bed3+
Organism
80
Homo sapiens
Biosample type
54
tissue
16
primary cell
10
in vitro differentiated cells
Organ
185
brain
139
pancreas
103
liver
95
heart
77
epithelium
71
vasculature
70
blood vessel
70
connective tissue
49
limb
32
adipose tissue
28
kidney
26
musculature of body
24
nerve
20
artery
15
vein
10
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
80
AMP
Genome assembly (visualization)
76
hg19
74
GRCh38
Lab
80
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
80 results
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ChIP-seq
tissue
tibial artery
18
ascending aorta
12
aorta
11
thoracic aorta
11
coronary artery
2
primary cell
endothelial cell of umbilical vein
15
brain microvascular endothelial cell
1
in vitro differentiated cells
pancreatic endoderm
10
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