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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
152
ChIP-seq
Assay category
152
DNA binding
Target of assay
338
transcription factor
152
histone modification
151
histone
125
control
82
recombinant protein
76
broad histone mark
75
narrow histone mark
58
RNA binding protein
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
48
October, 2019
33
August, 2017
27
May, 2020
17
December, 2017
15
November, 2017
6
August, 2021
6
May, 2019
Available data
131
bigWig
129
bed narrowPeak
128
bam
83
bigBed narrowPeak
58
tagAlign
45
fastq
14
bed broadPeak
14
bigBed broadPeak
3
bed bed3+
Organism
152
Homo sapiens
Biosample type
119
tissue
18
cell line
12
in vitro differentiated cells
3
primary cell
Organ
187
brain
151
pancreas
103
liver
97
heart
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
152
AMP
Genome assembly (visualization)
131
hg19
117
GRCh38
Lab
149
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
12
inconsistent control read length
BIOSAMPLE
ASSAY
152 results
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Clear Filters
ChIP-seq
tissue
liver
65
tibial nerve
24
tibial artery
18
muscle of leg
6
right lobe of liver
5
+ See 1 more…
cell line
HepG2
18
in vitro differentiated cells
hepatocyte
12
primary cell
hepatocyte
3
See all biosamples
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