Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
Assay category
54
DNA binding
Target of assay
111
histone
111
histone modification
56
broad histone mark
54
narrow histone mark
48
transcription factor
36
control
11
RNA binding protein
3
chromatin remodeller
Date released
16
August, 2017
13
December, 2017
10
May, 2021
8
February, 2018
7
August, 2021
Available data
40
bam
39
bed narrowPeak
39
bigWig
33
fastq
11
tagAlign
5
bigBed narrowPeak
4
bed bed3+
Organism
54
Homo sapiens
Biosample type
277
tissue
84
primary cell
54
in vitro differentiated cells
10
cell line
1
stem cell
Organ
16
connective tissue
8
embryo
8
epithelium
5
liver
pancreas
Project
54
AMP
Genome assembly (visualization)
39
GRCh38
39
hg19
Lab
44
AMP-T2D consortium
10
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
organ_slims!
pancreas
BIOSAMPLE
ASSAY
54 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
in vitro differentiated cells
adipocyte
16
embryonic stem cell
11
neural progenitor cell
7
pancreatic endoderm
6
hepatocyte
5
Hepatic endoderm
2
definitive endodermal cell
2
primitive gut cell
2
Posterior foregut
1
endocrine cell
1
posterior foregut
1
See all biosamples
Download