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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
Assay category
13
DNA binding
Target of assay
32
control
27
transcription factor
21
histone
21
histone modification
13
narrow histone mark
8
broad histone mark
1
RNA binding protein
Date released
10
August, 2017
2
October, 2019
1
November, 2017
Available data
409
bigWig
bed narrowPeak
387
bam
142
tagAlign
133
bigBed narrowPeak
109
fastq
29
bed broadPeak
14
bigBed broadPeak
13
bed bed3+
1
tagAlign bed3+
Organism
13
Homo sapiens
Biosample type
8
primary cell
4
tissue
1
cell line
Organ
10
pancreas
2
brain
1
liver
Project
13
AMP
Genome assembly (visualization)
13
hg19
12
GRCh38
Lab
13
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
1
inconsistent control read length
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
13 results
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ChIP-seq
primary cell
pancreatic endocrine cell
8
tissue
islet of Langerhans
2
dorsal plus ventral thalamus
1
planum polare
1
cell line
HepG2
1
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