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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
ChIP-seq
Assay category
115
DNA binding
Target of assay
185
histone
185
histone modification
115
narrow histone mark
70
broad histone mark
31
control
3
RNA binding protein
3
transcription factor
Date released
72
October, 2019
31
November, 2017
10
May, 2019
2
October, 2017
Available data
104
bed narrowPeak
104
bigWig
103
bam
54
tagAlign
33
bigBed narrowPeak
8
bed broadPeak
4
fastq
3
bigBed broadPeak
1
tagAlign bed3+
Organism
115
Homo sapiens
Biosample type
112
tissue
3
primary cell
Organ
115
brain
67
pancreas
60
liver
39
epithelium
29
connective tissue
26
vasculature
25
blood vessel
23
heart
15
limb
13
kidney
12
adipose tissue
10
musculature of body
8
nerve
6
artery
6
embryo
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
115
AMP
Genome assembly (visualization)
105
GRCh38
90
hg19
Lab
115
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
1
missing controlled_by
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
115 results
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ChIP-seq
tissue
layer of hippocampus
8
angular gyrus
7
substantia nigra
6
caudate nucleus
5
cingulate gyrus
5
+ See 61 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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