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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
307
ChIP-seq
Assay category
307
DNA binding
Target of assay
591
histone modification
590
histone
307
narrow histone mark
283
broad histone mark
187
control
89
transcription factor
23
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
129
October, 2019
50
August, 2017
33
May, 2019
28
November, 2017
27
May, 2020
23
April, 2019
11
October, 2018
2
December, 2017
2
January, 2019
2
October, 2017
Available data
251
bigWig
249
bed narrowPeak
241
bam
110
tagAlign
108
bigBed narrowPeak
28
fastq
15
bed broadPeak
6
bed bed3+
1
tagAlign bed3+
Organism
305
Homo sapiens
Biosample type
307
tissue
75
primary cell
55
in vitro differentiated cells
17
cell line
1
stem cell
Organ
114
brain
44
liver
30
pancreas
23
heart
18
blood vessel
18
vasculature
15
limb
13
connective tissue
12
adipose tissue
10
kidney
9
musculature of body
8
nerve
6
artery
4
gonad
4
ovary
2
eye
2
spleen
1
lymph node
1
pituitary gland
Project
307
AMP
2
T1D
Genome assembly (visualization)
237
hg19
234
GRCh38
Lab
307
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
BIOSAMPLE
ASSAY
307 results
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Clear Filters
ChIP-seq
tissue
liver
42
islet of Langerhans
35
subcutaneous abdominal adipose tissue
11
kidney
10
heart left ventricle
9
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