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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
Assay category
64
DNA binding
Target of assay
132
histone
132
histone modification
68
broad histone mark
64
narrow histone mark
42
control
18
transcription factor
8
RNA binding protein
2
nucleotide modification
Date released
34
August, 2017
15
September, 2018
11
October, 2018
2
March, 2020
1
May, 2019
1
May, 2021
Available data
60
bigWig
58
bam
50
bed narrowPeak
48
fastq
16
bigBed narrowPeak
7
tagAlign
6
bed bed3+
4
bed broadPeak
Organism
62
Homo sapiens
Biosample type
32
tissue
31
primary cell
cell line
1
in vitro differentiated cells
Organ
117
brain
64
pancreas
51
liver
43
epithelium
33
connective tissue
26
vasculature
25
blood vessel
25
heart
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
lymph node
1
pituitary gland
Project
62
AMP
2
T1D
Genome assembly (visualization)
60
hg19
58
GRCh38
Lab
64
AMP-T2D consortium
Audit category:
26
missing controlled_by
Audit category:
6
inconsistent control read length
biosample_type!
cell line
BIOSAMPLE
ASSAY
64 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
16
body of pancreas
6
endocrine pancreas
6
pancreas
4
primary cell
pancreatic endocrine cell
12
pancreatic ductal cell
7
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
in vitro differentiated cells
pancreatic PP cell
1
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