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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
144
ChIP-seq
Assay category
144
DNA binding
Target of assay
403
transcription factor
379
histone
379
histone modification
235
broad histone mark
144
narrow histone mark
91
RNA binding protein
81
recombinant protein
33
chromatin remodeller
5
other context
5
other post-translational modification
Date released
34
May, 2019
28
November, 2017
22
April, 2019
20
October, 2019
12
August, 2017
11
June, 2019
11
October, 2018
3
January, 2019
2
December, 2017
1
October, 2017
Available data
385
bigWig
374
bed narrowPeak
364
bam
162
tagAlign
144
bigBed narrowPeak
77
fastq
29
bed broadPeak
14
bigBed broadPeak
9
bed bed3+
1
tagAlign bed3+
Organism
142
Homo sapiens
Biosample type
108
tissue
26
primary cell
10
cell line
in vitro differentiated cells
Organ
33
brain
25
vasculature
24
blood vessel
22
heart
19
pancreas
14
limb
10
epithelium
10
kidney
9
liver
8
nerve
6
artery
6
musculature of body
5
connective tissue
5
vein
2
spleen
1
adipose tissue
1
blood
1
bodily fluid
1
eye
Project
144
AMP
Genome assembly (visualization)
143
GRCh38
128
hg19
Lab
144
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
8
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
144 results
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Clear Filters
ChIP-seq
tissue
heart left ventricle
8
kidney
8
tibial nerve
8
body of pancreas
6
endocrine pancreas
6
+ See 25 more…
primary cell
skeletal muscle myoblast
6
endothelial cell of umbilical vein
5
skeletal muscle satellite cell
3
cardiac fibroblast
2
mesenchymal stem cell
2
+ See 8 more…
cell line
HepG2
6
Panc1
3
GM12878
1
See all biosamples
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