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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
Assay category
75
DNA binding
Target of assay
410
transcription factor
152
histone
152
histone modification
121
control
89
recombinant protein
76
RNA binding protein
76
broad histone mark
75
narrow histone mark
33
chromatin remodeller
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
16
August, 2017
14
December, 2017
12
May, 2021
9
August, 2021
8
February, 2018
7
November, 2017
4
November, 2019
3
October, 2019
1
January, 2019
1
March, 2020
Available data
60
bigWig
59
bam
59
bed narrowPeak
42
fastq
17
tagAlign
15
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
5
bed bed3+
Organism
75
Homo sapiens
Biosample type
tissue
primary cell
55
in vitro differentiated cells
19
cell line
1
stem cell
Organ
16
connective tissue
14
epithelium
14
liver
10
pancreas
8
embryo
1
blood
1
bodily fluid
Project
73
AMP
2
T1D
Genome assembly (visualization)
60
hg19
57
GRCh38
Lab
63
AMP-T2D consortium
10
Kyle Gaulton, UCSD
2
Bing Ren, UCSD
Audit category:
8
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
8
inconsistent control read length
biosample_type!
tissue
primary cell
BIOSAMPLE
ASSAY
75 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
adipocyte
16
embryonic stem cell
11
neural progenitor cell
7
pancreatic endoderm
6
hepatocyte
5
+ See 7 more…
cell line
HepG2
9
EndoC_BH1
6
Panc1
3
GM12878
1
stem cell
hESC
1
See all biosamples
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