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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
Assay category
12
DNA binding
Target of assay
335
transcription factor
88
recombinant protein
79
control
58
RNA binding protein
24
histone
24
histone modification
19
chromatin remodeller
12
broad histone mark
12
narrow histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
4
November, 2019
3
October, 2019
August, 2021
2
November, 2017
1
January, 2019
1
March, 2020
1
May, 2021
Available data
12
bam
12
bed narrowPeak
12
bigWig
6
bigBed narrowPeak
3
fastq
1
bed broadPeak
1
bigBed broadPeak
Organism
12
Homo sapiens
Biosample type
321
tissue
108
primary cell
46
in vitro differentiated cells
12
cell line
Organ
9
pancreas
6
epithelium
2
liver
1
blood
1
bodily fluid
Project
10
AMP
2
T1D
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
12
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
inconsistent control read length
audit.WARNING.category!
inconsistent control read length
month_released!
August, 2021
BIOSAMPLE
ASSAY
12 results
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ChIP-seq
cell line
EndoC_BH1
6
Panc1
3
HepG2
2
GM12878
1
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