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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
Assay category
13
DNA binding
Target of assay
317
transcription factor
89
recombinant protein
83
control
61
RNA binding protein
26
chromatin remodeller
24
histone
24
histone modification
13
narrow histone mark
11
broad histone mark
3
nucleotide modification
1
other context
1
other post-translational modification
Date released
4
November, 2019
3
October, 2019
2
August, 2021
1
January, 2019
1
March, 2020
1
May, 2021
1
November, 2017
Available data
19
bigWig
18
bed narrowPeak
17
bam
10
bigBed narrowPeak
8
fastq
6
bed broadPeak
bigBed broadPeak
5
tagAlign
Organism
13
Homo sapiens
Biosample type
309
tissue
107
primary cell
55
in vitro differentiated cells
13
cell line
1
stem cell
Organ
9
pancreas
6
epithelium
3
liver
1
blood
1
bodily fluid
Project
11
AMP
2
T1D
Genome assembly (visualization)
13
hg19
11
GRCh38
Lab
11
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
6
inconsistent ontology term
Audit category:
1
missing controlled_by
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
13 results
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Clear Filters
ChIP-seq
cell line
EndoC_BH1
6
HepG2
3
Panc1
3
GM12878
1
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