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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
Assay category
17
DNA binding
Target of assay
350
transcription factor
89
recombinant protein
76
control
64
RNA binding protein
35
histone
35
histone modification
30
chromatin remodeller
18
broad histone mark
17
narrow histone mark
2
other context
2
other post-translational modification
Date released
7
November, 2017
4
November, 2019
3
October, 2019
1
January, 2019
1
March, 2020
1
May, 2021
Available data
17
bam
17
bigWig
16
bed narrowPeak
10
bigBed narrowPeak
8
fastq
6
bed broadPeak
6
bigBed broadPeak
5
tagAlign
Organism
17
Homo sapiens
Biosample type
309
tissue
65
primary cell
45
in vitro differentiated cells
17
cell line
1
stem cell
Organ
9
pancreas
7
liver
6
epithelium
1
blood
1
bodily fluid
Project
15
AMP
2
T1D
Genome assembly (visualization)
17
hg19
16
GRCh38
Lab
17
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
6
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
cell line
HepG2
7
EndoC_BH1
6
Panc1
3
GM12878
1
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