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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
ChIP-seq
Assay category
62
DNA binding
Target of assay
314
control
124
histone
124
histone modification
62
broad histone mark
62
narrow histone mark
6
transcription factor
5
nucleotide modification
3
RNA binding protein
1
recombinant protein
Date released
28
August, 2017
24
October, 2019
May, 2021
8
November, 2017
1
December, 2017
1
October, 2017
Available data
bigWig
363
bam
362
bed narrowPeak
149
bigBed narrowPeak
133
tagAlign
110
fastq
29
bed broadPeak
14
bigBed broadPeak
13
bed bed3+
1
tagAlign bed3+
Organism
62
Homo sapiens
Biosample type
56
tissue
5
in vitro differentiated cells
1
primary cell
Organ
15
connective tissue
11
brain
10
adipose tissue
8
liver
4
gonad
4
ovary
4
pancreas
2
eye
2
musculature of body
1
blood vessel
1
embryo
1
epithelium
1
limb
1
lymph node
1
vasculature
1
vein
Project
62
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
62
AMP-T2D consortium
Audit category:
1
missing controlled_by
files.file_type!
bigWig
month_released!
May, 2021
BIOSAMPLE
ASSAY
62 results
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ChIP-seq
tissue
islet of Langerhans
25
subcutaneous abdominal adipose tissue
10
liver
8
cingulate gyrus
3
skeletal muscle tissue
2
+ See 7 more…
in vitro differentiated cells
adipocyte
4
pancreatic endoderm
1
primary cell
endothelial cell of umbilical vein
1
See all biosamples
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