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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ChIP-seq
Assay category
38
DNA binding
Target of assay
65
histone
65
histone modification
49
transcription factor
36
broad histone mark
29
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
20
November, 2017
17
August, 2017
1
October, 2017
Available data
526
bigWig
514
bed narrowPeak
508
bam
242
bigBed narrowPeak
199
fastq
174
tagAlign
38
bed broadPeak
23
bigBed broadPeak
15
bed bed3+
1
tagAlign bed3+
1
tar
Organism
36
Homo sapiens
Biosample type
15
tissue
13
primary cell
10
cell line
Organ
11
brain
10
liver
5
musculature of body
4
epithelium
4
pancreas
4
vasculature
2
blood vessel
1
adipose tissue
1
connective tissue
Project
38
AMP
Genome assembly (visualization)
38
hg19
26
GRCh38
Lab
38
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
7
inconsistent control read length
BIOSAMPLE
ASSAY
38 results
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ChIP-seq
tissue
skeletal muscle tissue
5
islet of Langerhans
2
pancreas
2
brain
1
caudate nucleus
1
+ See 4 more…
primary cell
skeletal muscle myoblast
7
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
cell line
HepG2
10
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