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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
Assay category
34
DNA binding
Target of assay
65
histone
65
histone modification
49
transcription factor
36
broad histone mark
29
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
17
November, 2017
16
August, 2017
1
October, 2017
Available data
461
bigWig
450
bed narrowPeak
441
bam
183
bigBed narrowPeak
174
tagAlign
146
fastq
34
bed broadPeak
19
bigBed broadPeak
13
bed bed3+
1
tagAlign bed3+
Organism
32
Homo sapiens
Biosample type
15
tissue
10
cell line
9
primary cell
Organ
10
liver
8
brain
5
musculature of body
4
pancreas
2
epithelium
2
vasculature
1
adipose tissue
1
blood vessel
1
connective tissue
Project
34
AMP
Genome assembly (visualization)
34
hg19
24
GRCh38
Lab
34
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
34 results
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ChIP-seq
tissue
skeletal muscle tissue
5
islet of Langerhans
2
pancreas
2
brain
1
caudate nucleus
1
+ See 4 more…
cell line
HepG2
10
primary cell
skeletal muscle myoblast
6
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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