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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
313
ChIP-seq
Assay category
313
DNA binding
Target of assay
604
histone modification
603
histone
481
transcription factor
313
narrow histone mark
289
broad histone mark
91
RNA binding protein
88
recombinant protein
35
chromatin remodeller
13
control
5
other context
5
other post-translational modification
Date released
109
October, 2019
38
August, 2017
33
May, 2019
27
May, 2020
27
November, 2017
23
April, 2019
15
December, 2017
11
October, 2018
9
August, 2021
8
February, 2018
4
November, 2019
3
January, 2019
3
March, 2020
2
May, 2021
1
October, 2017
Available data
313
bigWig
310
bed narrowPeak
302
bam
127
tagAlign
123
bigBed narrowPeak
70
fastq
21
bed broadPeak
11
bed bed3+
6
bigBed broadPeak
1
tagAlign bed3+
Organism
311
Homo sapiens
Biosample type
253
tissue
primary cell
40
in vitro differentiated cells
19
cell line
1
stem cell
Organ
103
brain
50
liver
38
pancreas
23
heart
18
blood vessel
18
vasculature
14
connective tissue
14
epithelium
14
limb
10
kidney
8
nerve
7
embryo
7
musculature of body
6
artery
2
adipose tissue
2
spleen
1
blood
1
bodily fluid
1
pituitary gland
Project
309
AMP
4
T1D
Genome assembly (visualization)
297
hg19
291
GRCh38
Lab
311
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
10
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
11
inconsistent control read length
biosample_type!
primary cell
BIOSAMPLE
ASSAY
313 results
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Clear Filters
ChIP-seq
tissue
liver
34
islet of Langerhans
12
kidney
10
heart left ventricle
9
tibial nerve
8
+ See 97 more…
in vitro differentiated cells
adipocyte
12
neural progenitor cell
7
hepatocyte
5
pancreatic endoderm
5
Hepatic endoderm
2
+ See 7 more…
cell line
HepG2
9
EndoC_BH1
6
Panc1
3
GM12878
1
stem cell
hESC
1
See all biosamples
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