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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
Assay category
56
DNA binding
Target of assay
319
transcription factor
103
control
97
histone modification
96
histone
82
recombinant protein
56
narrow histone mark
54
RNA binding protein
40
broad histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
27
May, 2020
13
August, 2017
7
December, 2017
7
November, 2017
August, 2021
2
October, 2019
Available data
48
bam
48
bigWig
47
bed narrowPeak
38
tagAlign
19
fastq
14
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
Organism
56
Homo sapiens
Biosample type
44
tissue
7
cell line
5
in vitro differentiated cells
Organ
117
brain
73
pancreas
56
liver
47
epithelium
40
heart
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
56
AMP
Genome assembly (visualization)
48
hg19
39
GRCh38
Lab
56
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
6
inconsistent control read length
month_released!
August, 2021
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
56 results
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Clear Filters
ChIP-seq
tissue
liver
42
right lobe of liver
2
cell line
HepG2
7
in vitro differentiated cells
hepatocyte
5
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