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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
Assay category
64
DNA binding
Target of assay
330
transcription factor
110
control
109
histone modification
108
histone
82
recombinant protein
64
narrow histone mark
57
RNA binding protein
44
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
27
May, 2020
13
August, 2017
12
December, 2017
7
November, 2017
August, 2021
3
February, 2018
2
October, 2019
Available data
56
bam
55
bigWig
54
bed narrowPeak
38
tagAlign
27
fastq
14
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
1
bed bed3+
Organism
64
Homo sapiens
Biosample type
44
tissue
13
in vitro differentiated cells
7
cell line
Organ
117
brain
73
pancreas
56
liver
47
epithelium
40
heart
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
64
AMP
Genome assembly (visualization)
55
hg19
46
GRCh38
Lab
64
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
7
inconsistent control read length
month_released!
August, 2021
BIOSAMPLE
ASSAY
64 results
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Clear Filters
ChIP-seq
tissue
liver
42
right lobe of liver
2
in vitro differentiated cells
pancreatic endoderm
6
hepatocyte
5
Hepatic endoderm
2
cell line
HepG2
7
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