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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
Assay category
45
DNA binding
Target of assay
83
histone
83
histone modification
45
narrow histone mark
38
broad histone mark
28
control
8
transcription factor
7
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
11
September, 2018
9
October, 2019
8
August, 2017
7
December, 2017
November, 2019
2
August, 2021
2
June, 2019
2
May, 2021
2
November, 2017
1
March, 2020
1
May, 2019
Available data
45
bam
44
bed narrowPeak
44
bigWig
28
fastq
15
bigBed narrowPeak
3
tagAlign
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
45
Homo sapiens
Biosample type
35
primary cell
8
in vitro differentiated cells
2
cell line
Organ
117
brain
69
pancreas
60
liver
45
epithelium
33
connective tissue
26
vasculature
25
blood vessel
25
heart
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
43
AMP
2
T1D
Genome assembly (visualization)
44
GRCh38
44
hg19
Lab
45
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
11
missing controlled_by
Audit category:
5
inconsistent control read length
month_released!
November, 2019
BIOSAMPLE
ASSAY
45 results
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Clear Filters
ChIP-seq
primary cell
pancreatic ductal cell
7
endothelial cell of umbilical vein
6
epithelial cell of proximal tubule
4
pancreatic acinar cell
4
pancreatic alpha cell
4
+ See 6 more…
in vitro differentiated cells
hepatocyte
5
Hepatic endoderm
2
pancreatic PP cell
1
cell line
EndoC_BH1
2
See all biosamples
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