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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
Assay category
28
DNA binding
Target of assay
62
histone
62
histone modification
49
transcription factor
34
broad histone mark
28
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
15
August, 2017
13
November, 2017
October, 2017
Available data
424
bigWig
413
bed narrowPeak
404
bam
172
tagAlign
148
bigBed narrowPeak
109
fastq
28
bed broadPeak
14
bigBed broadPeak
13
bed bed3+
1
tagAlign bed3+
Organism
26
Homo sapiens
Biosample type
14
tissue
8
primary cell
6
cell line
Organ
7
brain
6
liver
5
musculature of body
4
pancreas
2
epithelium
2
vasculature
1
adipose tissue
1
blood vessel
1
connective tissue
Project
28
AMP
Genome assembly (visualization)
28
hg19
18
GRCh38
Lab
28
AMP-T2D consortium
Audit category:
5
inconsistent control read length
month_released!
October, 2017
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
tissue
skeletal muscle tissue
5
islet of Langerhans
2
pancreas
2
caudate nucleus
1
cingulate gyrus
1
+ See 3 more…
primary cell
skeletal muscle myoblast
5
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
cell line
HepG2
6
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