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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
Assay category
20
DNA binding
Target of assay
46
histone
46
histone modification
44
transcription factor
26
broad histone mark
20
narrow histone mark
4
RNA binding protein
4
chromatin remodeller
1
other context
1
other post-translational modification
Date released
10
August, 2017
10
November, 2017
October, 2017
Available data
327
bigWig
324
bed narrowPeak
301
bam
125
tagAlign
122
bigBed narrowPeak
69
fastq
20
bed broadPeak
11
bed bed3+
6
bigBed broadPeak
1
tagAlign bed3+
Organism
18
Homo sapiens
Biosample type
14
tissue
primary cell
6
cell line
Organ
6
liver
5
musculature of body
4
brain
4
pancreas
1
adipose tissue
1
connective tissue
Project
20
AMP
Genome assembly (visualization)
20
hg19
10
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
5
inconsistent control read length
month_released!
October, 2017
biosample_type!
primary cell
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
tissue
skeletal muscle tissue
5
islet of Langerhans
2
pancreas
2
caudate nucleus
1
cingulate gyrus
1
+ See 3 more…
cell line
HepG2
6
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