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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
Assay category
27
DNA binding
Target of assay
59
histone
59
histone modification
48
transcription factor
32
broad histone mark
27
narrow histone mark
8
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
15
August, 2017
12
November, 2017
October, 2017
Available data
415
bigWig
404
bed narrowPeak
379
bam
172
tagAlign
124
bigBed narrowPeak
108
fastq
27
bed broadPeak
13
bed bed3+
13
bigBed broadPeak
1
tagAlign bed3+
Organism
25
Homo sapiens
Biosample type
14
tissue
7
primary cell
6
cell line
Organ
7
brain
6
liver
5
musculature of body
4
pancreas
2
epithelium
2
vasculature
1
adipose tissue
blood vessel
1
connective tissue
Project
27
AMP
Genome assembly (visualization)
27
hg19
17
GRCh38
Lab
27
AMP-T2D consortium
Audit category:
5
inconsistent control read length
month_released!
October, 2017
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
tissue
skeletal muscle tissue
5
islet of Langerhans
2
pancreas
2
caudate nucleus
1
cingulate gyrus
1
+ See 3 more…
primary cell
skeletal muscle myoblast
5
astrocyte of the cerebellum
1
choroid plexus epithelial cell
1
cell line
HepG2
6
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