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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
ChIP-seq
Assay category
82
DNA binding
Target of assay
187
histone modification
186
histone
103
broad histone mark
82
narrow histone mark
48
control
28
transcription factor
6
RNA binding protein
3
chromatin remodeller
Date released
141
October, 2019
82
August, 2017
64
May, 2021
38
November, 2017
34
May, 2019
27
May, 2020
23
April, 2019
15
May, 2024
15
September, 2018
11
December, 2017
11
June, 2019
11
October, 2018
9
August, 2021
8
February, 2018
4
November, 2019
3
January, 2019
3
March, 2020
2
October, 2017
Available data
60
bigWig
52
bam
52
fastq
50
bed narrowPeak
29
tagAlign
15
bed broadPeak
12
bigBed narrowPeak
bed bed3+
5
bigBed broadPeak
Organism
80
Homo sapiens
Biosample type
44
tissue
22
primary cell
16
in vitro differentiated cells
Organ
28
connective tissue
28
pancreas
13
liver
12
adipose tissue
8
epithelium
7
musculature of body
Project
82
AMP
Genome assembly (visualization)
54
hg19
46
GRCh38
Lab
82
AMP-T2D consortium
Audit category:
8
missing controlled_by
Audit category:
7
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
82 results
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Clear Filters
ChIP-seq
tissue
liver
13
subcutaneous abdominal adipose tissue
11
islet of Langerhans
8
skeletal muscle tissue
7
pancreas
4
+ See 1 more…
primary cell
pancreatic endocrine cell
8
skeletal muscle myoblast
6
pancreatic alpha cell
4
pancreatic beta cell
4
in vitro differentiated cells
adipocyte
16
See all biosamples
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