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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
Assay category
18
DNA binding
Target of assay
43
histone
43
histone modification
42
transcription factor
25
broad histone mark
24
control
18
narrow histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
141
October, 2019
88
August, 2017
64
May, 2021
38
November, 2017
34
May, 2019
27
May, 2020
23
April, 2019
16
December, 2017
15
September, 2018
11
August, 2021
11
June, 2019
11
October, 2018
8
February, 2018
4
November, 2019
3
January, 2019
3
March, 2020
2
October, 2017
Available data
17
bam
17
fastq
16
bed narrowPeak
16
bigWig
8
bigBed narrowPeak
5
bed bed3+
2
tagAlign
1
bed broadPeak
Organism
18
Homo sapiens
Biosample type
13
in vitro differentiated cells
4
tissue
1
stem cell
Organ
7
epithelium
7
liver
5
embryo
2
brain
Project
18
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
18
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
in vitro differentiated cells
hepatocyte
5
pancreatic endoderm
3
Hepatic endoderm
2
Posterior foregut
1
definitive endodermal cell
1
+ See 1 more…
tissue
brain
2
right lobe of liver
2
stem cell
hESC
1
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