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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
ChIP-seq
Assay category
115
DNA binding
Target of assay
226
histone modification
225
histone
115
narrow histone mark
109
broad histone mark
73
control
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
141
October, 2019
88
August, 2017
64
May, 2021
38
November, 2017
34
May, 2019
27
May, 2020
23
April, 2019
16
December, 2017
15
September, 2018
11
August, 2021
11
June, 2019
11
October, 2018
8
February, 2018
4
November, 2019
3
January, 2019
3
March, 2020
2
October, 2017
Available data
87
bigWig
79
bam
77
bed narrowPeak
56
tagAlign
52
fastq
15
bed broadPeak
12
bigBed narrowPeak
6
bed bed3+
5
bigBed broadPeak
Organism
113
Homo sapiens
Biosample type
77
tissue
22
primary cell
16
in vitro differentiated cells
Organ
40
liver
34
pancreas
28
connective tissue
12
adipose tissue
8
epithelium
7
musculature of body
Project
115
AMP
Genome assembly (visualization)
87
hg19
71
GRCh38
Lab
115
AMP-T2D consortium
Audit category:
11
missing controlled_by
Audit category:
7
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
BIOSAMPLE
ASSAY
115 results
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Clear Filters
ChIP-seq
tissue
liver
40
islet of Langerhans
14
subcutaneous abdominal adipose tissue
11
skeletal muscle tissue
7
pancreas
4
+ See 1 more…
primary cell
pancreatic endocrine cell
8
skeletal muscle myoblast
6
pancreatic alpha cell
4
pancreatic beta cell
4
in vitro differentiated cells
adipocyte
16
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