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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
Assay category
42
DNA binding
Target of assay
77
histone
77
histone modification
42
narrow histone mark
35
broad histone mark
27
control
8
transcription factor
7
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
11
September, 2018
8
August, 2017
7
December, 2017
4
November, 2019
3
October, 2019
2
August, 2021
2
June, 2019
2
May, 2021
1
March, 2020
1
May, 2019
1
November, 2017
Available data
42
bam
42
bed narrowPeak
42
bigWig
27
fastq
9
bigBed narrowPeak
3
tagAlign
2
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
42
Homo sapiens
Biosample type
28
primary cell
8
in vitro differentiated cells
6
cell line
Organ
117
brain
73
pancreas
60
liver
49
epithelium
40
heart
33
connective tissue
26
vasculature
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
40
AMP
2
T1D
Genome assembly (visualization)
42
GRCh38
42
hg19
Lab
42
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
Audit category:
11
missing controlled_by
Audit category:
5
inconsistent control read length
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
42 results
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Clear Filters
ChIP-seq
primary cell
pancreatic ductal cell
7
epithelial cell of proximal tubule
4
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
+ See 4 more…
in vitro differentiated cells
hepatocyte
5
Hepatic endoderm
2
pancreatic PP cell
1
cell line
EndoC_BH1
6
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