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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
Assay category
21
DNA binding
Target of assay
53
histone
53
histone modification
46
transcription factor
32
broad histone mark
21
narrow histone mark
6
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
15
August, 2017
6
November, 2017
Available data
334
bigWig
323
bed narrowPeak
300
bam
120
tagAlign
116
bigBed narrowPeak
106
fastq
21
bed broadPeak
13
bed bed3+
11
bigBed broadPeak
Organism
19
Homo sapiens
Biosample type
10
tissue
6
cell line
5
primary cell
Organ
brain
6
liver
5
musculature of body
4
pancreas
2
epithelium
2
vasculature
1
adipose tissue
1
blood vessel
1
connective tissue
Project
21
AMP
Genome assembly (visualization)
21
hg19
12
GRCh38
Lab
21
AMP-T2D consortium
Audit category:
5
inconsistent control read length
organ_slims!
brain
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
tissue
skeletal muscle tissue
5
islet of Langerhans
2
pancreas
2
subcutaneous abdominal adipose tissue
1
cell line
HepG2
6
primary cell
skeletal muscle myoblast
5
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