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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
Assay category
27
DNA binding
Target of assay
61
histone
61
histone modification
47
transcription factor
34
broad histone mark
27
narrow histone mark
7
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
15
August, 2017
11
November, 2017
1
October, 2017
Available data
377
bigWig
366
bed narrowPeak
356
bam
171
tagAlign
134
bigBed narrowPeak
82
fastq
27
bed broadPeak
12
bigBed broadPeak
11
bed bed3+
1
tagAlign bed3+
Organism
25
Homo sapiens
Biosample type
15
tissue
6
cell line
6
primary cell
Organ
8
brain
6
liver
5
musculature of body
4
pancreas
epithelium
2
vasculature
1
adipose tissue
1
blood vessel
1
connective tissue
Project
27
AMP
Genome assembly (visualization)
27
hg19
17
GRCh38
Lab
27
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
organ_slims!
epithelium
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
tissue
skeletal muscle tissue
5
islet of Langerhans
2
pancreas
2
brain
1
caudate nucleus
1
+ See 4 more…
cell line
HepG2
6
primary cell
skeletal muscle myoblast
5
astrocyte of the cerebellum
1
See all biosamples
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