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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
116
ChIP-seq
Assay category
116
DNA binding
Target of assay
186
histone
186
histone modification
116
narrow histone mark
70
broad histone mark
31
control
3
RNA binding protein
3
transcription factor
Date released
73
October, 2019
31
November, 2017
10
May, 2019
2
October, 2017
Available data
105
bed narrowPeak
105
bigWig
104
bam
53
tagAlign
33
bigBed narrowPeak
8
bed broadPeak
4
fastq
3
bigBed broadPeak
1
tagAlign bed3+
Organism
116
Homo sapiens
Biosample type
113
tissue
3
primary cell
Organ
117
brain
73
pancreas
60
liver
49
epithelium
33
connective tissue
26
vasculature
25
blood vessel
25
heart
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
pituitary gland
Project
116
AMP
Genome assembly (visualization)
106
GRCh38
91
hg19
Lab
116
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
organ_slims!
pituitary gland
BIOSAMPLE
ASSAY
116 results
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ChIP-seq
tissue
layer of hippocampus
8
angular gyrus
7
substantia nigra
6
caudate nucleus
5
cingulate gyrus
5
+ See 62 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
See all biosamples
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