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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
Assay category
19
DNA binding
Target of assay
327
transcription factor
82
recombinant protein
77
control
57
RNA binding protein
45
histone modification
44
histone
25
broad histone mark
23
chromatin remodeller
19
narrow histone mark
2
other context
2
other post-translational modification
Date released
7
December, 2017
7
November, 2017
5
August, 2017
Available data
52
bigWig
51
bed narrowPeak
50
bam
40
tagAlign
19
fastq
14
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
2
bed bed3+
Organism
19
Homo sapiens
Biosample type
7
cell line
7
tissue
5
in vitro differentiated cells
Organ
48
pancreas
28
epithelium
19
liver
13
connective tissue
8
embryo
4
brain
2
spleen
2
vasculature
1
adipose tissue
1
blood
1
blood vessel
1
bodily fluid
Project
19
AMP
Genome assembly (visualization)
19
hg19
18
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
cell line
HepG2
7
tissue
liver
5
right lobe of liver
2
in vitro differentiated cells
hepatocyte
5
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