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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
366
transcription factor
102
control
82
recombinant protein
71
histone modification
70
histone
66
RNA binding protein
37
broad histone mark
32
narrow histone mark
25
chromatin remodeller
2
other context
2
other post-translational modification
Date released
18
August, 2017
7
December, 2017
7
November, 2017
Available data
70
bigWig
69
bed narrowPeak
67
bam
47
tagAlign
32
fastq
19
bigBed narrowPeak
7
bed broadPeak
6
bigBed broadPeak
2
bed bed3+
Organism
32
Homo sapiens
Biosample type
17
in vitro differentiated cells
8
tissue
7
cell line
Organ
48
pancreas
28
epithelium
19
liver
13
connective tissue
8
embryo
4
brain
2
spleen
2
vasculature
1
adipose tissue
1
blood
1
blood vessel
1
bodily fluid
Project
32
AMP
Genome assembly (visualization)
32
hg19
31
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
in vitro differentiated cells
adipocyte
12
hepatocyte
5
tissue
liver
5
right lobe of liver
2
adipose tissue
1
cell line
HepG2
7
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