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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
Assay category
60
DNA binding
Target of assay
338
transcription factor
108
control
103
histone modification
102
histone
82
recombinant protein
60
narrow histone mark
58
RNA binding protein
42
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
27
May, 2020
13
August, 2017
7
December, 2017
7
November, 2017
4
August, 2021
2
October, 2019
Available data
52
bigWig
51
bed narrowPeak
50
bam
40
tagAlign
19
fastq
14
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
2
bed bed3+
Organism
60
Homo sapiens
Biosample type
44
tissue
9
cell line
5
in vitro differentiated cells
2
primary cell
Organ
117
brain
73
pancreas
60
liver
49
epithelium
40
heart
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
60
AMP
Genome assembly (visualization)
52
hg19
41
GRCh38
Lab
58
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
6
inconsistent control read length
organ_slims!
spleen
BIOSAMPLE
ASSAY
60 results
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Clear Filters
ChIP-seq
tissue
liver
42
right lobe of liver
2
cell line
HepG2
9
in vitro differentiated cells
hepatocyte
5
primary cell
hepatocyte
2
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