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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
Assay category
9
DNA binding
Target of assay
297
transcription factor
82
recombinant protein
60
control
54
RNA binding protein
20
chromatin remodeller
18
histone
18
histone modification
9
broad histone mark
9
narrow histone mark
2
other context
2
other post-translational modification
Date released
7
November, 2017
2
August, 2021
Available data
9
bigWig
8
bed narrowPeak
7
bam
7
fastq
6
bed broadPeak
6
bigBed broadPeak
6
bigBed narrowPeak
5
tagAlign
Organism
9
Homo sapiens
Biosample type
44
tissue
9
cell line
5
in vitro differentiated cells
2
primary cell
Organ
9
liver
9
pancreas
6
epithelium
1
blood
1
bodily fluid
Project
9
AMP
Genome assembly (visualization)
9
hg19
6
GRCh38
Lab
7
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
organ_slims!
vasculature
BIOSAMPLE
ASSAY
9 results
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ChIP-seq
cell line
HepG2
9
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