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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
168
ChIP-seq
Assay category
168
DNA binding
Target of assay
338
transcription factor
108
control
103
histone modification
102
histone
82
recombinant protein
60
narrow histone mark
58
RNA binding protein
42
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
63
November, 2017
50
May, 2020
24
August, 2017
20
December, 2017
9
August, 2021
2
October, 2019
Available data
151
bam
96
fastq
68
tagAlign
65
bigWig
51
bed narrowPeak
14
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
3
bed bed3+
Organism
168
Homo sapiens
Biosample type
90
tissue
69
cell line
6
in vitro differentiated cells
3
primary cell
Organ
168
liver
148
brain
126
pancreas
79
epithelium
68
connective tissue
48
vasculature
46
blood vessel
45
heart
36
adipose tissue
32
limb
27
kidney
19
musculature of body
19
nerve
15
artery
15
embryo
10
spleen
8
vein
7
blood
7
bodily fluid
4
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
168
AMP
Genome assembly (visualization)
66
hg19
42
GRCh38
Lab
162
AMP-T2D consortium
6
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
168 results
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Clear Filters
ChIP-seq
tissue
liver
85
right lobe of liver
5
cell line
HepG2
69
in vitro differentiated cells
hepatocyte
6
primary cell
hepatocyte
3
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