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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
Assay category
66
DNA binding
Target of assay
329
transcription factor
83
histone modification
82
histone
78
recombinant protein
55
RNA binding protein
52
narrow histone mark
30
broad histone mark
23
chromatin remodeller
14
control
2
other context
2
other post-translational modification
Date released
27
May, 2020
20
November, 2017
7
December, 2017
6
August, 2017
4
August, 2021
2
October, 2019
Available data
65
bigWig
64
bam
51
bed narrowPeak
35
tagAlign
33
fastq
14
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
3
bed bed3+
Organism
66
Homo sapiens
Biosample type
37
tissue
22
cell line
5
in vitro differentiated cells
2
primary cell
Organ
98
brain
71
pancreas
66
liver
50
epithelium
27
vasculature
25
blood vessel
25
heart
19
connective tissue
15
kidney
14
limb
11
musculature of body
8
embryo
8
nerve
6
artery
5
vein
2
adipose tissue
2
spleen
1
blood
1
bodily fluid
1
eye
1
pituitary gland
Project
66
AMP
Genome assembly (visualization)
66
hg19
42
GRCh38
Lab
64
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
66 results
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Clear Filters
ChIP-seq
tissue
liver
35
right lobe of liver
2
cell line
HepG2
22
in vitro differentiated cells
hepatocyte
5
primary cell
hepatocyte
2
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