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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
159
ChIP-seq
Assay category
159
DNA binding
Target of assay
336
transcription factor
106
control
88
histone modification
87
histone
82
recombinant protein
56
RNA binding protein
53
narrow histone mark
34
broad histone mark
22
chromatin remodeller
2
other context
2
other post-translational modification
Date released
63
November, 2017
50
May, 2020
24
August, 2017
14
December, 2017
6
August, 2021
2
October, 2019
Available data
142
bam
90
fastq
65
tagAlign
58
bigWig
44
bed narrowPeak
9
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
1
bed bed3+
Organism
159
Homo sapiens
Biosample type
90
tissue
69
cell line
Organ
168
liver
148
brain
126
pancreas
epithelium
68
connective tissue
60
heart
48
vasculature
46
blood vessel
36
adipose tissue
32
limb
27
kidney
19
musculature of body
19
nerve
15
artery
15
embryo
10
spleen
8
vein
7
blood
7
bodily fluid
4
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
159
AMP
Genome assembly (visualization)
59
hg19
35
GRCh38
Lab
153
AMP-T2D consortium
6
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
6
inconsistent control read length
organ_slims!
epithelium
BIOSAMPLE
ASSAY
159 results
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Clear Filters
ChIP-seq
tissue
liver
85
right lobe of liver
5
cell line
HepG2
69
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