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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
172
ChIP-seq
Assay category
172
DNA binding
Target of assay
338
transcription factor
108
control
107
histone modification
106
histone
82
recombinant protein
64
narrow histone mark
58
RNA binding protein
42
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
63
November, 2017
50
May, 2020
24
August, 2017
20
December, 2017
9
August, 2021
6
October, 2019
Available data
151
bam
96
fastq
68
tagAlign
65
bigWig
51
bed narrowPeak
14
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
3
bed bed3+
Organism
172
Homo sapiens
Biosample type
94
tissue
69
cell line
6
in vitro differentiated cells
3
primary cell
Organ
168
liver
148
brain
126
pancreas
79
epithelium
68
connective tissue
60
heart
48
vasculature
46
blood vessel
36
adipose tissue
32
limb
27
kidney
19
musculature of body
19
nerve
15
artery
15
embryo
10
spleen
8
vein
7
blood
7
bodily fluid
4
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
172
AMP
Genome assembly (visualization)
66
hg19
42
GRCh38
Lab
166
AMP-T2D consortium
6
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
172 results
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Clear Filters
ChIP-seq
tissue
liver
85
right lobe of liver
5
islet of Langerhans
4
cell line
HepG2
69
in vitro differentiated cells
hepatocyte
6
primary cell
hepatocyte
3
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