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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
Assay category
50
DNA binding
Target of assay
94
histone
94
histone modification
50
narrow histone mark
44
broad histone mark
30
control
9
transcription factor
8
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
11
September, 2018
10
October, 2019
8
August, 2017
7
December, 2017
4
November, 2019
2
August, 2021
2
June, 2019
2
May, 2021
2
November, 2017
1
March, 2020
1
May, 2019
Available data
49
bam
48
bed narrowPeak
48
bigWig
28
fastq
15
bigBed narrowPeak
3
tagAlign
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
50
Homo sapiens
Biosample type
35
primary cell
8
in vitro differentiated cells
6
cell line
1
tissue
Organ
117
brain
73
pancreas
60
liver
49
epithelium
40
heart
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
48
AMP
2
T1D
Genome assembly (visualization)
48
GRCh38
48
hg19
Lab
50
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
Audit category:
11
missing controlled_by
Audit category:
5
inconsistent control read length
BIOSAMPLE
ASSAY
50 results
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Clear Filters
ChIP-seq
primary cell
pancreatic ductal cell
7
endothelial cell of umbilical vein
6
epithelial cell of proximal tubule
4
pancreatic acinar cell
4
pancreatic alpha cell
4
+ See 6 more…
in vitro differentiated cells
hepatocyte
5
Hepatic endoderm
2
pancreatic PP cell
1
cell line
EndoC_BH1
6
tissue
islet of Langerhans
1
See all biosamples
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